Gtk-CRITICAL error

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Last post

Fri, 07/05/2019 - 17:31

julianamartinez

Gtk-CRITICAL error

Hi,

I'm getting an error when lauching cisTEM or when trying to create a new refinement package. The error is:

Gtk-CRITICAL **: IA__gtk_tree_row_reference_new_proxy: assertion 'path->depth > 0' failed

Does anyone have any sugestions?

Thanks,

Juliana

Mon, 07/08/2019 - 11:28

timgrant

Hi Juliana,

This GTK error is probably not a problem - does cisTEM not launch?

Tim

Mon, 07/08/2019 - 13:11

julianamartinez

Hi Tim,

Thanks for your help! cisTEM either doesn't launch or it crashes when attempet to perform an action.

Juliana

Mon, 07/08/2019 - 13:16

timgrant

Hi Juliana,

Is this the downloaded binaries, or did you compile yourself? What machine is this running on?

Tim

Mon, 07/08/2019 - 13:22

(Reply to #4) #5

julianamartinez

I think it is the downloaded

I think it is the downloaded binaries, I'm not compiling anything myself. I'm running cisTEM on our cluster at the NIH (biowulf).

Juliana

Mon, 07/08/2019 - 13:39

timgrant

Hi Juliana,

That has worked before i believe? Are you running the GUI on the head node?

Can you tell me exactly when it crashes? Does it load the project when you open a project? Is there anything else printed in the terminal?

Tim

Mon, 07/08/2019 - 19:34

(Reply to #6) #7

julianamartinez

Hi Tim,

Yes I have run cisTEM in aour cluster multiple times, and I use an interactive session to run it. As I mentiones before if crashes either when try to launch it or after loading the project and I tried to do an action, specifically I was trying to create a refinement package or run 2D classification.

this is what it is in the terminal:

Thanks,

Juliana

Mon, 07/08/2019 - 22:05

timgrant

Hi Juliana,

I can't see anything pasted after "this is what is in the terminal"?

Is it possible you have run out of disk space?

Tim

Tue, 07/09/2019 - 08:38

julianamartinez

Hi Tim,

Sorry about that, it says:

cisTEM

(cisTEM:6777): Gtk-CRITICAL **: IA__gtk_tree_row_reference_new_proxy: assertion 'path->depth > 0' failed

Aborted

No, we have plenty space.

Thanks,

Juliana

Tue, 07/09/2019 - 14:50

#10

timgrant

Hi Juliana,

Aborted means it is crashing for some reason. Does this happen with new projects, or just this particular project?

Tim

Tue, 07/09/2019 - 14:53

(Reply to #10) #11

julianamartinez

Hi Tim,

Just in one project, I have created a new project for this data set and it is working but I had to redo everything again.

Thanks,

Juliana

Tue, 07/09/2019 - 16:12

#12

timgrant

Hi Juliana,

I am sorry you had to do this. We can try and get to the bottom of it if you want - I can send you a debug version which you could run to try and solve the problem?

If you would rather just leave it, I also can understand that.

Tim