Error during movie alignment

gayayadav

Error during movie alignment

Hello all,

I got the following error during the alignment of movies.

    error, cannot open file (/dev/null)

Though the job finished aligning all the movies, but not able to terminate the job.

Is it because of insufficient memory?

When I tried to bin during importing, it does not have any error.

 

Thanks

 

Wed, 03/17/2021 - 20:51

timgrant

the /dev/null is an error you can hopefully ignore.  IF it runs on bin samples, it may be a memory problem.

How many processes are you using?  You may need to use less.

Thanks,

Tim

Fri, 03/19/2021 - 17:33

gayayadav

It is related to summed images to display in GUI. No, error with summed images for display checked.

Are aligned images are dose weighted as I provided the dose per frame during the import of movies?

Thanks

Fri, 03/19/2021 - 20:16

gayayadav

Is there a way to restart the same job that was stopped due to rebooting of the system?

 

Fri, 03/19/2021 - 20:54

timgrant

No, results are not stored until a job completes. so if it dies partway through it has to be run again.  Once finished, the results will be saved.

 

Tim