cisTEM crashes during Ab initio Reconstruction (GUI Socket Disconnected)

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Anne
cisTEM crashes during Ab initio Reconstruction (GUI Socket Disconnected)

 

Hi, 

I am trying to generate an Ab initin in cisTEM (beta version) and the program keeps crashing after a couple of cycles. I generally get the message below.

How do I fix this problem? It seems that others have had similar issues.

 

 

Box size for reconstruction = 16, binning factor = 2.250000

Calculating reconstruction...

   100% [=================] done! (0h:00m00s)                

Dumping reconstruction arrays...

Reconstruct3D: Normal termination

   100% [=================] done! (0h:00m00s)                

Dumping reconstruction arrays...

Reconstruct3D: Normal termination

JOB CONTROL : Master Socket Disconnected!!
Running...

 JOB CONTROL: Trying to connect to 146.189.59.72:3000 (timeout = 4 sec) ...
 JOB CONTROL: Succeeded - Connection established!

JOB CONTROL : GUI Socket Disconnected!!

 

timgrant
Hi Anne,

Hi Anne,

Does it crash on the merge step in the GUI?  What is the pixel size, MW and largest dimension and box size of this refinement package?

Thanks!

Tim

Anne
Ab Initio Reconstruction Crashing

Hi Tim

I seem to be running in the same issues. To answer your question from las post, pixel size: 0.83. MW: 190, LD: 250, Box Size: 256.

 

Thanks,

Anne

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