error trying to save 2DTM output

2 posts / 0 new

Mon, 10/10/2022 - 17:54

zlw

Hi,

When I click the floppy disc to save the table with info about my peaks during 2DTM, I get the following error and the program crashes regardless of the option I choose (screenshot attached).

Is this a bug or some issue with my system?

Thanks,

Zoe

File:

cistem-error.png

Thu, 12/01/2022 - 16:55

Bronwyn

Hi Zoe,

This is a bug, we haven't been using this feature. You can access the data another way. In cisTEM there is a commandline program called "make_template_result" that will give you:

1. A coordinate.txt file that is pretty much the displayed table.

2. A "result.mrc" file that has the best matching projections in 2D

3. A "slab.mrc" that shows the best matching orientations as 3D volumes

We are currently making our own shell scripts for batch processing. The files you need are saved in the Assets/TemplateMatching/ directory and are numbered (zero indexed) per image in the order that you ran the searches.

Cheers,

Bronwyn